The core of WEBKNOSSOS is free. Upgrade for advanced features and tighter collaboration.
Find here a detailed overview of all features and the plans they belong to.
Free
from 5.000€
Custom
Free
Free
from 5.000€
Custom
Free
Visualization
Visualization
Visualization
Fast browsing of large 3D imagesAccess and navigate datasets ranging from gigabytes to petabytes directly in your browser on any device, including laptops and iPads. This feature enables seamless collaboration and rapid data access without requiring any installations.
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Visualization
Fast browsing of large 3D imagesAccess and navigate datasets ranging from gigabytes to petabytes directly in your browser on any device, including laptops and iPads. This feature enables seamless collaboration and rapid data access without requiring any installations.
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3D Meshes visualizationExplore your data in 3D with automatically generated meshes. WEBKNOSSOS generates meshes from volume annotations or pre-computed segmentations.
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc
Visualization
3D Meshes visualizationExplore your data in 3D with automatically generated meshes. WEBKNOSSOS generates meshes from volume annotations or pre-computed segmentations.
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc
Render animationsCreate animation of your data.
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Visualization
Render animationsCreate animation of your data.
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Time seriesVisualize and annotate your data in N-dimensions.
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Visualization
Time seriesVisualize and annotate your data in N-dimensions.
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Annotations
Annotations
Annotations
Volume annotationsCreate volume annotations (i.e. segmentations) with manual brush tools. Use the interpolation feature to speed up annotation in 3D. Download the annotations to train a machine learning model or for visualization purposes.
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Annotations
Volume annotationsCreate volume annotations (i.e. segmentations) with manual brush tools. Use the interpolation feature to speed up annotation in 3D. Download the annotations to train a machine learning model or for visualization purposes.
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AI-based quick-select toolAccelerate your segmentation workflow with the AI-based quick-select tool, powered by Segment Anything.
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Annotations
AI-based quick-select toolAccelerate your segmentation workflow with the AI-based quick-select tool, powered by Segment Anything.
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Skeleton annotationsCreate skeleton annotations of neurons, measure their path lengths and organize these skeletons in hierarchical groups. Add comments to specific nodes to highlight areas of interest within your data.
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Annotations
Skeleton annotationsCreate skeleton annotations of neurons, measure their path lengths and organize these skeletons in hierarchical groups. Add comments to specific nodes to highlight areas of interest within your data.
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Connectomics proofreadingQuickly fix split and merge errors with the supervoxel graph edit feature. Select a segment to start with and split or merge along the borders of sub-segments of the underlying segmentation.
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Annotations
Connectomics proofreadingQuickly fix split and merge errors with the supervoxel graph edit feature. Select a segment to start with and split or merge along the borders of sub-segments of the underlying segmentation.
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Collaborative annotation and project managementSet up tasks for your annotators and use auto-assignment to distribute the work. Keep track of the progress with monitoring reports. Download all created annotations in a merged file for further processing.
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Annotations
Collaborative annotation and project managementSet up tasks for your annotators and use auto-assignment to distribute the work. Keep track of the progress with monitoring reports. Download all created annotations in a merged file for further processing.
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Autosave and VersioningWEBKNOSSOS auto-saves annotations every 30s and keeps a versioned history of every action in all annotations. Annotation data on WEBKNOSSOS is externally backed up daily.
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Annotations
Autosave and VersioningWEBKNOSSOS auto-saves annotations every 30s and keeps a versioned history of every action in all annotations. Annotation data on WEBKNOSSOS is externally backed up daily.
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Data Handling
Data Handling
Data Handling
Data sharingInvite your colleagues and collaborators to WEBKNOSSOS and share your data with them. Because your data is in the cloud, every dataset and annotation has a link that you can share.
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Data Handling
Data sharingInvite your colleagues and collaborators to WEBKNOSSOS and share your data with them. Because your data is in the cloud, every dataset and annotation has a link that you can share.
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Dataset managementUse WEBKNOSSOS as a centralized storage for your large-scale datasets. Fine-grained user access levels and subteams help you manage datasets securely within your organization.
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Data Handling
Dataset managementUse WEBKNOSSOS as a centralized storage for your large-scale datasets. Fine-grained user access levels and subteams help you manage datasets securely within your organization.
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Easy import and exportDrag'n'drop data upload and conversion, TIFF export from the UI, and more.
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Data Handling
Easy import and exportDrag'n'drop data upload and conversion, TIFF export from the UI, and more.
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Zarr streamingStream your data from WEBKNOSSOS into other applications, e.g. Neuroglancer. Stream data from cloud storage or HTTP servers into WEBKNOSSOS.
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Data Handling
Zarr streamingStream your data from WEBKNOSSOS into other applications, e.g. Neuroglancer. Stream data from cloud storage or HTTP servers into WEBKNOSSOS.
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Automation with PythonUse our webknossos Python package to convert, download, upload, and stream data to automate your workflow and create custom analysis.
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Data Handling
Automation with PythonUse our webknossos Python package to convert, download, upload, and stream data to automate your workflow and create custom analysis.
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Hosting
Hosting
Hosting
Worry-free hostingManaged hosting, upgrades, systems monitoring
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Hosting
Worry-free hostingManaged hosting, upgrades, systems monitoring
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Deployment optionsWEBKNOSSOS works best when deployed close to the data. Either you upload the data to our server or we install WEBKNOSSOS on your server.
Our server
Our server
Our server, your server or a custom solution
DIY
Hosting
Deployment optionsWEBKNOSSOS works best when deployed close to the data. Either you upload the data to our server or we install WEBKNOSSOS on your server.
Our server
Our server
Our server, your server or a custom solution
DIY
Single Sign-On integrationConnect WEBKNOSSOS with your Open ID Connect (OIDC) system
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Hosting
Single Sign-On integrationConnect WEBKNOSSOS with your Open ID Connect (OIDC) system
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BackupsDaily backups of your annotations.
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Hosting
BackupsDaily backups of your annotations.
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Quotas
Quotas
Quotas
Users
max. 3
5 included+ 500€/user/year
Custom
Unlimited
Quotas
Users
max. 3
5 included+ 500€/user/year
Custom
Unlimited
StorageRemotely streamed Zarr data does not count against your quota.
max. 50 GB
1 TB included+ 500€/TB/year
Custom
Your own storage space
Quotas
StorageRemotely streamed Zarr data does not count against your quota.
max. 50 GB
1 TB included+ 500€/TB/year
Custom
Your own storage space
More
More
More
Community dataset galleryFeature your dataset in our publication gallery, making it accessible to the broader scientific community and supporting recognition of your research efforts.
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Community dataset galleryFeature your dataset in our publication gallery, making it accessible to the broader scientific community and supporting recognition of your research efforts.
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Links to your data in publicationsEasily link your data in publications with sharing links. The even shorts wklinks enhance clarity and facilitate straight-forward data access and citations.
Sharing link
Sharing link
Sharing link and wklink
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Links to your data in publicationsEasily link your data in publications with sharing links. The even shorts wklinks enhance clarity and facilitate straight-forward data access and citations.
Sharing link
Sharing link
Sharing link and wklink
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DOI GenerationGenerate permanent and citable DOIs for your published data and annotations.
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DOI GenerationGenerate permanent and citable DOIs for your published data and annotations.
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Support
Email support and webinars
Email support and hands-on workshops
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Support
Email support and webinars
Email support and hands-on workshops